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Jesus Castagnetto 🇵🇪

@jmcastagnetto@mastodon.social
mastodon 4.8.0-nightly.2026-10-06
  • Open on mastodon.social

Also in BlueSky: https://bsky.app/profile/jmcastagnetto.bsky.social

Chemist (PhD, NYU '97), Bioinformatics mangler, Biomedical Informatics dabbler, Data artisan, R scribbler, Metalloprotein DB creator, former PHP/PEAR kludger.
#Rstats #OpenData #Science #BiomedicalInformatics #DataScience #DataVisualization #DataEngineering #PublicHealthInformatics #DataForGood
#dator

0 Followers
0 Following
38 Posts
Joined May 12, 2022
Personal Site:
https://castagnetto.site
Github:
https://github.com/jmcastagnetto
ORCID:
https://orcid.org/0000-0002-7188-1605
Other links:
https://linktr.ee/jmcastagnetto
Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago

A good article on the #Claude #code #leak:

"The Snake That Ate Itself: What Claude Code’s Source Revealed About #AI #Engineering Culture"

'... The Uncomfortable Truth

The company that sells AI coding tools cannot build a quality product with its own AI coding tools...'

https://techtrenches.dev/p/the-snake-that-ate-itself-what-claude

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 4mo ago

"Who will maintain the #web when PHP’s veterans retire?"

... A new Perforce report finds PHP's #developer base is aging out faster than it's being replenished — and #AI-generated code may be making the problem worse, not better ...

#PHP #OpenSource #JuniorDevs

https://thenewstack.io/php-web-skills-hiring-age/

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 7mo ago

#TIL that, again, #Djikstra was a ahead of his time, saying that what we call #VibeCoding is flawed because a language is a less precise tool than a formal representation:

'On the foolishness of "natural language programming"' (late 1970s)
https://www.cs.utexas.edu/~EWD/transcriptions/EWD06xx/EWD667.html

#AI

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 7mo ago

From Scientific American: "AI was supposed to save coders time. It may be doing the opposite"
https://www.scientificamerican.com/article/why-developers-using-ai-are-working-longer-hours/

#VibeCoding #Code #Developers #AI

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 2mo ago
Replying to
And #Nature had a piece on this same topic yesterday: "International PhD students to face strict limits on time in the #us#science #universityhttps://www.nature.com/articles/d41586-026-02280-3 So sad, I cannot in good conscience recommend students to consider a PhD in USA under these circumstances.
nature.com
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago
Replying to
@jonthegeek@fosstodon.org @Mehrad@fosstodon.org I'd seen this type of representation before. There is an #Rstats package that does that type of #dataviz: https://github.com/uRosConf/voronoiTreemap
GitHub

GitHub - uRosConf/voronoiTreemap: R package for voronoi treemaps with added interactivity by shiny

R package for voronoi treemaps with added interactivity by shiny - uRosConf/voronoiTreemap

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago

#TIL about an #RStats package made by a cool group from Univesity of #Chile to deal with #ICD10 and #ICD11 in #PublicHealth and #HealthInteroperability work:

https://github.com/RodoTasso/ciecl

#Health #DataScience

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

A good article from #Nature: "How to design effective scientific figures"
https://www.nature.com/articles/s41562-026-02466-9

#Science #Dataviz

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 4mo ago
Replying to
@sean@mastodon.me.uk Yep, I guess PHP has always been pragmatic. Used it back in the late '90s all through the '00s, for putting a web "face" to my bioinformatics research, and it was easy for a scientist like me to pick it up. Even got to co-author one of the first books on the language :-)
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago

From The Register:
"#NHS staff resist using #Palantir #software"

'...Staff reportedly cite #ethics concerns, #privacy worries, and doubt the platform adds much..
'

#Surveillance #SurveillanceCapitalism

https://www.theregister.com/2026/04/03/nhs_staff_against_palantir/?td=keepreading

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

From #SMBC:

https://www.smbc-comics.com/comic/meaning-7

Hover text: "The worst part is the robot makes him use reddit 7 hours a day, because that's what past employees were doing in its training data."

#Humor #DarkHumor #AI

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago
Replying to
@BRicker @emjonaitis I have had good experience dealing with datasets in the hundreds of millions, using duckdb as the local database. Also, judicious use of parquet partitions might help.
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Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago
Replying to
@hrbrmstr@mastodon.social An announcement that sounds a tad presidential for some weird reason 🤣
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

From The Register: "Brit #mathematician lets #AI #agent loose with credit card – cue password #leaks, CAPTCHA #chaos and more"

https://www.theregister.com/software/2026/05/05/british-mathematician-hands-openclaw-agent-a-credit-card/5228654

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

From #Futurism: "The Horrible #Economics of #AI Are Starting to Come Crashing Down"

#AIBubble

https://futurism.com/artificial-intelligence/economics-ai-tokens-crashing-down

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

The evaluation of #Anthropic #Mythos by #AISI #UK, does not seem to demonstrate the super-cracking ability mentioned elsewhere. It is noted its specific ability to chain attacks.

https://www.aisi.gov.uk/blog/our-evaluation-of-claude-mythos-previews-cyber-capabilities

See also: https://arstechnica.com/ai/2026/04/uk-govs-mythos-ai-tests-help-separate-cybersecurity-threat-from-hype/

#AI #Security

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago
Replying to
@hrbrmstr Nice to have the drops back. Also, congrats for the new job!
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

#TIL about this good #IBM video explaining clearly and didactically what #AI technical debt means, its causes and impact:

https://youtu.be/DgXV8QSlI4U?si=siQ0OY8kzpyNVSbX

#FOMO #TechnicalDebt #VibeCoding

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 9mo ago

"Defunding #fungi: #US’s living library of ‘vital ecosystem engineers’ is in danger of closing"

#Science #crisis #USA #Biology

https://www.theguardian.com/environment/2025/dec/26/arbuscular-mycorrhizal-fungi-living-library-vital-ecosystem-engineers

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Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

"Alibaba’s Tongyi Lab Releases #VimRAG: a Multimodal #RAG #Framework that Uses a Memory #Graph to Navigate Massive Visual Contexts"

#AI #MultimodalRAG

https://www.marktechpost.com/2026/04/10/alibabas-tongyi-lab-releases-vimrag-a-multimodal-rag-framework-that-uses-a-memory-graph-to-navigate-massive-visual-contexts/

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

A very interesting paper from #Nature that discusses current trends and gives an outlook of future developments:

"Tracing the rise of #biomedical foundation #models"

https://www.nature.com/articles/s41587-026-03135-y

#AI

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

#TIL about the new book by the #Internet #Archive: "Vanishing #Culture: A Report on Our Fragile Cultural Record (2026)"

#InternetArchive #ebook #OpenAccess

https://archive.org/details/vanishing-culture-2026

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago

#RedClara y #CUDI están convocando a un "#Programa Piloto #LMM #Federado"

https://cudi.edu.mx/noticias/lmm-federado

#LLM #AI #Model #LATAM

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

From Venture Beat: "One command turns any open-source repo into an #AI #agent #backdoor. #OpenClaw proved no supply-chain scanner has a detection category for it"

#Security #OpenSource

https://venturebeat.com/security/one-command-open-source-repo-ai-agent-backdoor-openclaw-supply-chain-scanner

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

An interesting podcast from #StackOverflow on #digital #sovereignty and #sovereign #AI.

"No country left behind with sovereign AI" https://stackoverflow.blog/2026/04/17/no-country-left-behind-with-sovereign-ai/

#SovereignAI

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago
Replying to
@knud Ideally, yes. But, for example, for us scientist in Peru, that is a very expensive proposition and one that is never covered by our universities. I am not sure about the situation for author of the paper I mentioned.
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Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

#TIL about the #Cisco #OpenSource tool: "#Model #Provenance Kit" https://github.com/cisco-ai-defense/model-provenance-kit

Tries to give a hand with tracking provenance as well as comparing #AI models.

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

A good take on #Dawkins suffering from #AIPsychosis thinking that #Claude is sentient:

"Richard Dawkins and The Claude Delusion"

https://garymarcus.substack.com/p/richard-dawkins-and-the-claude-delusion

#AI

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 2mo ago
"#Global #childhood #immunization coverage inches forward despite conflict and hesitancy – #UNICEF, #WHO" https://www.who.int/news/item/15-07-2026-global-childhood-immunization-coverage-inches-forward-despite-conflict-and-hesitancy---unicef--who #vaccination #health #GlobalHealth
who.int
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago
Replying to
@hrbrmstr This bit is very direct, hopefully we all survive and learn from 'the reckoning': ¨... The reckoning will not be subtle. The firms still doing the work properly will be in a position to charge for it. The firms that have hollowed themselves out will discover that what they hollowed out was the thing the client was paying for. ..."
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago
Replying to
@jonthegeek@fosstodon.org @Mehrad@fosstodon.org BTW, for some reason when trying to connect to data.one.org from #Peru, I get blocked with a 403. Had to use a VPN connected to USA to be able to reach that site.
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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago
Replying to
@peribotsarah The article's point is not that is a startup, but that the code written by their own code AI model is not good at all. Not sure if I will *still* consider Anthropic a startup at this point.
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Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

I have an unfounded theory that in #Peru we are low key training people to do complex estimations and take multidimensional decision, otherwise why have 35 different parties, and have to cast 5 distinct votes in today's #election: president, national senate, regional senate, deputies (congress representative for the #USA folks), and Andean Parliament. And then we got preferential votes.

The voting ballot was huge (see the models here https://eg2026.onpe.gob.pe/cedula/descarga-tu-cedula/ with made up parties).

#vote2026

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 6mo ago

Oncoming #Security #Webinar by #OAS (#OEA):

Take Control of Your #Digital Security: Introducing the Updated Gender-Responsive #Cybersecurity MOOC "Our Networks, Our Security"

https://oas-org.zoom.us/webinar/register/WN_9qZ5uBG6Qlm8GE00H76_ww#/registration

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

From #Berkeley: "How We Broke Top #AI #Agent #Benchmarks: And What Comes Next"

https://rdi.berkeley.edu/blog/trustworthy-benchmarks-cont/

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Open post
Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 4mo ago
Replying to
@davidgerard@circumstances.run Well, it will not be worse than the quality of the JS, Python, Java, C, C++ code out there. That is more a problem on how the AI models are trained, w/o a simple quality control to guide the selection. Same can be said for the text, images, etc. the companies feed the models.
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Jesus Castagnetto 🇵🇪 @jmcastagnetto@mastodon.social
· 5mo ago

From #OWID: "What is the most #unequal country in South America? It depends on what metric you look at"

https://ourworldindata.org/data-insights/what-is-the-most-unequal-country-in-south-america-it-depends-on-what-metric-you-look-at

In my country, #Peru, 0.1% gets 22% of the income. Extremely unequal.

#SouthAmerica #Economics #Disparity

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